最終更新日:2022/12/24
We excluded sites where the outgroup reference was in disagreement with both the D. yakuba reference and D. yakuba SNPs, as well as triallelic SNPs, sites with reference sequence of ‘N’, or SNPs identified in the VCF for the reference, suggesting inaccuracies in reference assembly or residual heterozygosity in the reference.
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We
excluded
sites
where
the
outgroup
reference
was
in
disagreement
with
both
the
D.
yakuba
reference
and
D.
yakuba
SNPs,
as
well
as
triallelic
SNPs,
sites
with
reference
sequence
of
‘N’,
or
SNPs
identified
in
the
VCF
for
the
reference,
suggesting
inaccuracies
in
reference
assembly
or
residual
heterozygosity
in
the
reference.